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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942983.1_cds_XP_016486310.1_77160
CDS Infomation

[gene=LOC107806631] [db_xref=GeneID:107806631] [protein=pectate lyase-like isoform X2] [protein_id=XP_016486310.1] [location=complement(join(20272..20581,20688..20887,20977..21353,21575..21878))] [gbkey=CDS]
Sequence

ATGGGAATCTCAAAAACAAAAATCAATGGGCTTATTGTCCTCTTATTCTTCACATTTGTC
GCAGTAGGGACAGCAGTGCCAGACAACAGCACAAGAAGGCACTTGTCCAAAAAATACAAA
GGACCATGTGTTGCTGCAAATCTTATTGACAAATGCTGGAGATGTGACCCTCGTTGGGCT
GATAATCGCCAAAAATATGCTGATTGTGCCATGGGTTTTGGCCGTACTGCTATTGGAGGA
AAAGGTGGAAGGATTTATGTAGTCACAGATCCTTCTGACAACAACGTCGAAAATCCCGTG
CCAGGTACCCTAAGGCATGCAGTGATCCAGAAGGAACCCTTGTGGATCATATTCTCAAAA
CATATGAAAATTAAGTTGAACAGGGAACTGCTTATGCAAAGCTACAAAACCATTGATGCA
CGTGGACACAATGTCCATATTGAAAATGGAGCTGGAATTAAGATGCAAGGTGTAAATAAC
ATTATTATCACTAATCTTCACATTCACAATATTGGACCTTCTTCTGGTGGCATGATCAGG
GACTCAATAGACCACATAGGTATCAGGGGTGCAGATGAAGGAGATGCTATTAGCATCTTC
GCGTCTCATGATATTTGGATCGACCACGTGTCGATGTCACGTGCCGCGGACGGGCTCATC
GACGCCGTCCAAGGATCAACGGGTATTACTATCTCCAATTGCCACTTTACTGACCACGAT
AAAGTAATGTTGTTTGGTGCAAATGATAATTACCTCGACGATAAGAAAATGCAAATCACA
TTAGCGTACAACCACTTTGGTAAGAGGTTGGATCAAAGGATGCCAAGGTGCAGGCTTGGA
TTCTTCCATCTTGTCAACAACGATTACACCCATTGGATGAGGTACGCCATTGGCGGTAGC
AGTGAAGCAACAATCATTAGCCAGGGTAATCGTTTTATTGCTCAACACAATGTTGATATT
AAAGAGGTGACACACAGGGAAAAGGCACAAGAATCAGAATGGAGACACTGGACTTGGTTA
TCACGAGATGATGACATGCAAAATGGTGCATTCTTTAGAACTTCTGGTGATCCAAATGCA
CTAAGCAAATTCAAGAACCTCAATTTGATGCCAGCAGAACCATCTTACAGAGTTGGAATT
CTTACTAAGTTTTCAGGATCACTCGGTTGCACAGTAGGACGCCCATGCTAG

Peptide Sequence

PEP ID

XP_016486310.1
PEP Infomation

PREDICTED: pectate lyase-like isoform X2 [Nicotiana tabacum]
Sequence

MGISKTKINGLIVLLFFTFVAVGTAVPDNSTRRHLSKKYKGPCVAANLIDKCWRCDPRWA
DNRQKYADCAMGFGRTAIGGKGGRIYVVTDPSDNNVENPVPGTLRHAVIQKEPLWIIFSK
HMKIKLNRELLMQSYKTIDARGHNVHIENGAGIKMQGVNNIIITNLHIHNIGPSSGGMIR
DSIDHIGIRGADEGDAISIFASHDIWIDHVSMSRAADGLIDAVQGSTGITISNCHFTDHD
KVMLFGANDNYLDDKKMQITLAYNHFGKRLDQRMPRCRLGFFHLVNNDYTHWMRYAIGGS
SEATIISQGNRFIAQHNVDIKEVTHREKAQESEWRHWTWLSRDDDMQNGAFFRTSGDPNA
LSKFKNLNLMPAEPSYRVGILTKFSGSLGCTVGRPC

Transcript Sequence

Gene sequence data has not been registered.